BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029E07SP1|AL429072
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1175 1677 0.0
>3x_Contig1175
Length = 4107
Score = 1677 bits (844), Expect = 0.0
Identities = 861/865 (99%), Gaps = 2/865 (0%)
Strand = Plus / Plus
Query: 5 tattctcncgtccttactccgtctctcatattcacgcgataggatttagttgatgttaca 64
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2873 tattctcccgtccttactccgtctctcatattcacgcgataggatttagttgatgttaca 2932
Query: 65 atttgtggtaatgcacactacaaccactmtgaaaacctctatgcggcgatcgcagcggct 124
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2933 atttgtggtaatgcacactacaaccact-tgaaaacctctatgcggcgatcgcagcggct 2991
Query: 125 cgttcgggcggtgctattagttctgaaaagactatttaggttctaaacgacattttcatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2992 cgttcgggcggtgctattagttctgaaaagactatttaggttctaaacgacattttcatt 3051
Query: 185 tttttttcctgcataatgttgcatgaaaatgaacagatctgatagaaagcataggattac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3052 tttttttcctgcataatgttgcatgaaaatgaacagatctgatagaaagcataggattac 3111
Query: 245 aagcccgaggaaatgcgtatcacagcacaacaaaaacatacacaaaacgacacttcctcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3112 aagcccgaggaaatgcgtatcacagcacaacaaaaacatacacaaaacgacacttcctcc 3171
Query: 305 cgaggaaagctccttaaggtatgttttgtatttagatatgcggcttccttgtggtttcta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3172 cgaggaaagctccttaaggtatgttttgtatttagatatgcggcttccttgtggtttcta 3231
Query: 365 ctcctttatcgtttgtgggggagccacttacactgtcaggaatctatctatcgctggtca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3232 ctcctttatcgtttgtgggggagccacttacactgtcaggaatctatctatcgctggtca 3291
Query: 425 aattctcagttccaagttttccacggaaaatgttcttttatctgcgtas-tctgcattag 483
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3292 aattctcagttccaagttttccacggaaaatgttcttttatctgcgtagctctgcattag 3351
Query: 484 tttttgattatcagattttccatgattgtaacggaaatatcatacaaatccgtttaacac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3352 tttttgattatcagattttccatgattgtaacggaaatatcatacaaatccgtttaacac 3411
Query: 544 ggaaatgcgattagaggccatttagttggagatgtagagacgcatgtacgtagcctagag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3412 ggaaatgcgattagaggccatttagttggagatgtagagacgcatgtacgtagcctagag 3471
Query: 604 ccaagaactgtagtatgtgttctcatgcccgtggcaacattttctgagattttccagcag 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3472 ccaagaactgtagtatgtgttctcatgcccgtggcaacattttctgagattttccagcag 3531
Query: 664 ttactttgaagtcttctcaattcatgtgcacttttgaactgtttttgttcactagaatgg 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3532 ttactttgaagtcttctcaattcatgtgcacttttgaactgtttttgttcactagaatgg 3591
Query: 724 tggtgaaaagtgcttcttagaccttttggcaaattcttcattagcaggtgtctatggtta 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3592 tggtgaaaagtgcttcttagaccttttggcaaattcttcattagcaggtgtctatggtta 3651
Query: 784 gtttttgagtcagttaggtgttgcaaatgttgattcaattgggttaattgtgctttttac 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3652 gtttttgagtcagttaggtgttgcaaatgttgattcaattgggttaattgtgctttttac 3711
Query: 844 ttttcttttctttggtttgggtgta 868
|||||||||||||||||||||||||
Sbjct: 3712 ttttcttttctttggtttgggtgta 3736
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6967
Number of Sequences: 1807
Number of extensions: 6967
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)